Interactomics Publication

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     </font><font size="2">- [[Media:Ci supplementary table1 Page 4.jpg | Supplementary table 1 - 4]]</font><br />
     </font><font size="2">- [[Media:Ci supplementary table1 Page 4.jpg | Supplementary table 1 - 4]]</font><br />
     - [[Media:Ci supplementary table3.jpg | Supplementary table 3]] </li>
     - [[Media:Ci supplementary table3.jpg | Supplementary table 3]] </li>
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     <li><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=15749693" rel="nofollow" title="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list uids=15749693" class="external">PSIbase: a database of Protein Structural Interactome map (PSIMAP).</a><span class="urlexpansion">&nbsp;(<em>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=15749693</em>)</span> Gong S, Yoon G, Jang I, Bolser D, Dafas P, Schroeder M, Choi H, Cho Y, Han K, Lee S, Choi H, Lappe M, Holm L, Kim S, Oh D, Bhak J. Bioinformatics. 2005 Mar 3 </li>
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     <li><a class="external" title="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list uids=15749693" rel="nofollow" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=15749693">PSIbase: a database of Protein Structural Interactome map (PSIMAP).</a><span class="urlexpansion">&nbsp;(<em>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=15749693</em>)</span> Gong S, Yoon G, Jang I, Bolser D, Dafas P, Schroeder M, Choi H, Cho Y, Han K, Lee S, Choi H, Lappe M, Holm L, Kim S, Oh D, Bhak J. Bioinformatics. 2005 Mar 3 </li>
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     <li><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=15613386" rel="nofollow" title="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list uids=15613386" class="external">Architecture of basic building blocks in protein and domain structural interaction networks</a><span class="urlexpansion">&nbsp;(<em>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=15613386</em>)</span>. Moon HS, [http://jongbhak.com Bhak J], Lee KH, Lee D.Bioinformatics. 2005 Apr 15;21(8):1479-86. Epub 2004 Dec 21. </li>
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     <li><a class="external" title="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list uids=15613386" rel="nofollow" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=15613386">Architecture of basic building blocks in protein and domain structural interaction networks</a><span class="urlexpansion">&nbsp;(<em>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=15613386</em>)</span>. Moon HS, [http://jongbhak.com Bhak J], Lee KH, Lee D.Bioinformatics. 2005 Apr 15;21(8):1479-86. Epub 2004 Dec 21. </li>
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     <li><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=15231539" rel="nofollow" title="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list uids=15231539" class="external">Using convex hulls to extract interaction interfaces from known structures.</a><span class="urlexpansion">&nbsp;(<em>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=15231539</em>)</span> Panos Dafas, Dan Bolser, Jacek Gomoluch, Jong Park and Michael Schroeder, Bioinformatics. 10 July 2004. 20(10):1486-1490<a rel="dofollow" href="http://www.all-auto.ro/auto-second-hand" title="vanzari auto"><img src="http://www.all-auto.ro/images/auto second hand" alt="vanzari auto" hspace="2" vspace="2" border="0" /></a>. </li>
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     <li><a class="external" title="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list uids=15231539" rel="nofollow" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=15231539">Using convex hulls to extract interaction interfaces from known structures.</a><span class="urlexpansion">&nbsp;(<em>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=15231539</em>)</span> Panos Dafas, Dan Bolser, Jacek Gomoluch, Jong Park and Michael Schroeder, Bioinformatics. 10 July 2004. 20(10):1486-1490<a title="vanzari auto" href="http://www.all-auto.ro/auto-second-hand" rel="dofollow"><img vspace="2" hspace="2" border="0" alt="vanzari auto" src="http://www.all-auto.ro/images/auto second hand" /></a>. </li>
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     <li><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=15117749" rel="nofollow" title="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list uids=15117749" class="external">HPID: The Human Protein Interaction Database.</a><span class="urlexpansion">&nbsp;(<em>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=15117749</em>)</span> Kyungsook Han, Byungkyu Park, Hyongguen Kim, Jinsun Hong and Jong Park, Bioinformatics, 29 Apr. 2004 (In press) </li>
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     <li><a class="external" title="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list uids=15117749" rel="nofollow" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=15117749">HPID: The Human Protein Interaction Database.</a><span class="urlexpansion">&nbsp;(<em>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=15117749</em>)</span> Kyungsook Han, Byungkyu Park, Hyongguen Kim, Jinsun Hong and Jong Park, Bioinformatics, 29 Apr. 2004 (In press) </li>
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     <li><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=14764552" rel="nofollow" title="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list uids=14764552" class="external">Large scale co-evolution analysis of Protein Structural Interlogues using the global Protein Structural Interactome Map(PSIMAP).</a><span class="urlexpansion">&nbsp;(<em>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=14764552</em>)</span> Wankyu Kim, Dan M. Bolser and Jong Park, Bioinformatics, 2004, 20(7):1138-1150. </li>
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     <li><a class="external" title="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list uids=14764552" rel="nofollow" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=14764552">Large scale co-evolution analysis of Protein Structural Interlogues using the global Protein Structural Interactome Map(PSIMAP).</a><span class="urlexpansion">&nbsp;(<em>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=14764552</em>)</span> Wankyu Kim, Dan M. Bolser and Jong Park, Bioinformatics, 2004, 20(7):1138-1150. </li>
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     <li><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=14531933" rel="nofollow" title="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list uids=14531933" class="external">Visualisation and Graph-theoretic Analysis of a Large-scale Protein Structural Interactome.</a><span class="urlexpansion">&nbsp;(<em>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=14531933</em>)</span> Dan M Bolser, Panos Dafas, Richard Harrington, Jong Park and Michael Schroeder, BMC Bioinformatics, 8 October 2003, 4;45:1471-2105. </li>
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     <li><a class="external" title="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list uids=14531933" rel="nofollow" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=14531933">Visualisation and Graph-theoretic Analysis of a Large-scale Protein Structural Interactome.</a><span class="urlexpansion">&nbsp;(<em>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=14531933</em>)</span> Dan M Bolser, Panos Dafas, Richard Harrington, Jong Park and Michael Schroeder, BMC Bioinformatics, 8 October 2003, 4;45:1471-2105. </li>
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     <li><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=12538268" rel="nofollow" title="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list uids=12538268" class="external">Visualization and Analysis of Protein Interactions.</a><span class="urlexpansion">&nbsp;(<em>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=12538268</em>)</span> Byonghyon Ju, ByungkyuPark, Jong Park and Kyungsook Han, Bioinformatics, 2003, 19:317-318. </li>
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     <li><a class="external" title="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list uids=12538268" rel="nofollow" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=12538268">Visualization and Analysis of Protein Interactions.</a><span class="urlexpansion">&nbsp;(<em>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=pubmed&amp;dopt=Abstract&amp;list_uids=12538268</em>)</span> Byonghyon Ju, ByungkyuPark, Jong Park and Kyungsook Han, Bioinformatics, 2003, 19:317-318. </li>
     <li>Predicting Protein Interactions in Human by Homologous Interactions in Yeast. Hyongguen Kim, Jong Park and Kyungsook Han, Lecture Notes in Computer Science, 2003, 2637:159-165. </li>
     <li>Predicting Protein Interactions in Human by Homologous Interactions in Yeast. Hyongguen Kim, Jong Park and Kyungsook Han, Lecture Notes in Computer Science, 2003, 2637:159-165. </li>
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     <li><a href="http://networkbiology.net/" rel="nofollow" title="http://networkbiology.net" class="external">Network Biology</a><span class="urlexpansion">&nbsp;(<em>http://networkbiology.net</em>)</span>: Datamining Biological Networks. <a href="http://csdl.computer.org/comp/mags/ex/2002/03/x3toc.htm" rel="nofollow" title="http://csdl.computer.org/comp/mags/ex/2002/03/x3toc.htm" class="external">IEEE Intelligent Systems</a><span class="urlexpansion">&nbsp;(<em>http://csdl.computer.org/comp/mags/ex/2002/03/x3toc.htm</em>)</span>, May/June (Vol. 17, No. 3, pp66-80). 2002 </li>
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     <li><a class="external" title="http://networkbiology.net" rel="nofollow" href="http://networkbiology.net/">Network Biology</a><span class="urlexpansion">&nbsp;(<em>http://networkbiology.net</em>)</span>: Datamining Biological Networks. <a class="external" title="http://csdl.computer.org/comp/mags/ex/2002/03/x3toc.htm" rel="nofollow" href="http://csdl.computer.org/comp/mags/ex/2002/03/x3toc.htm">IEEE Intelligent Systems</a><span class="urlexpansion">&nbsp;(<em>http://csdl.computer.org/comp/mags/ex/2002/03/x3toc.htm</em>)</span>, May/June (Vol. 17, No. 3, pp66-80). 2002 </li>
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     <li><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;list_uids=11791232&amp;dopt=Abstract" rel="nofollow" title="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;list uids=11791232&amp;dopt=Abstract" class="external">The Conservation of Protein Interaction Network in Evolution.</a><span class="urlexpansion">&nbsp;(<em>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;list_uids=11791232&amp;dopt=Abstract</em>)</span> <a href="http://www.jsbi.org/journal/GIW01/GIW01F14.html" rel="nofollow" title="http://www.jsbi.org/journal/GIW01/GIW01F14.html" class="external">GIW2001</a><span class="urlexpansion">&nbsp;(<em>http://www.jsbi.org/journal/GIW01/GIW01F14.html</em>)</span>: The Twelfth International Conference on Genome Informatics, Tokyo Japan, 2001. </li>
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     <li><a class="external" title="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;list uids=11791232&amp;dopt=Abstract" rel="nofollow" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;list_uids=11791232&amp;dopt=Abstract">The Conservation of Protein Interaction Network in Evolution.</a><span class="urlexpansion">&nbsp;(<em>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;list_uids=11791232&amp;dopt=Abstract</em>)</span> <a class="external" title="http://www.jsbi.org/journal/GIW01/GIW01F14.html" rel="nofollow" href="http://www.jsbi.org/journal/GIW01/GIW01F14.html">GIW2001</a><span class="urlexpansion">&nbsp;(<em>http://www.jsbi.org/journal/GIW01/GIW01F14.html</em>)</span>: The Twelfth International Conference on Genome Informatics, Tokyo Japan, 2001. </li>
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     <li><a href="http://bio.cc/PSIMAP/Paper/PSIMAP_bioinformatics_2001.html" rel="nofollow" title="http://bio.cc/PSIMAP/Paper/PSIMAP bioinformatics 2001.html" class="external">Generating protein interactioin map from incomplete data: application of fold assignment.</a><span class="urlexpansion">&nbsp;(<em>http://bio.cc/PSIMAP/Paper/PSIMAP_bioinformatics_2001.html</em>)</span> Lappe M, Park J, Niggemann O, Holm L. Bioinformatics. 2001;17 Suppl 1:S149-56. <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;list_uids=11473004&amp;dopt=Abstract" rel="nofollow" title="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;list uids=11473004&amp;dopt=Abstract" class="external">PMID: 11473004</a><span class="urlexpansion">&nbsp;(<em>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;list_uids=11473004&amp;dopt=Abstract</em>)</span> [PubMed - indexed for MEDLINE]. <a href="http://bio.cc/PSIMAP/Paper/bioinformatics_paper_for_fold_assignment_2001.pdf" rel="nofollow" title="http://bio.cc/PSIMAP/Paper/bioinformatics paper for fold assignment 2001.pdf" class="external">PDF file</a><span class="urlexpansion">&nbsp;(<em>http://bio.cc/PSIMAP/Paper/bioinformatics_paper_for_fold_assignment_2001.pdf</em>)</span> <a href="http://www.all-auto.ro/dezmembrari-auto">dezmembrari auto</a> </li>
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     <li><a class="external" title="http://bio.cc/PSIMAP/Paper/PSIMAP bioinformatics 2001.html" rel="nofollow" href="http://bio.cc/PSIMAP/Paper/PSIMAP_bioinformatics_2001.html">Generating protein interactioin map from incomplete data: application of fold assignment.</a><span class="urlexpansion">&nbsp;(<em>http://bio.cc/PSIMAP/Paper/PSIMAP_bioinformatics_2001.html</em>)</span> Lappe M, Park J, Niggemann O, Holm L. Bioinformatics. 2001;17 Suppl 1:S149-56. <a class="external" title="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;list uids=11473004&amp;dopt=Abstract" rel="nofollow" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;list_uids=11473004&amp;dopt=Abstract">PMID: 11473004</a><span class="urlexpansion">&nbsp;(<em>http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;db=PubMed&amp;list_uids=11473004&amp;dopt=Abstract</em>)</span> [PubMed - indexed for MEDLINE]. <a class="external" title="http://bio.cc/PSIMAP/Paper/bioinformatics paper for fold assignment 2001.pdf" rel="nofollow" href="http://bio.cc/PSIMAP/Paper/bioinformatics_paper_for_fold_assignment_2001.pdf">PDF file</a><span class="urlexpansion">&nbsp;(<em>http://bio.cc/PSIMAP/Paper/bioinformatics_paper_for_fold_assignment_2001.pdf</em>)</span> <a href="http://www.all-auto.ro/dezmembrari-auto">dezmembrari auto</a> </li>
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     <li>Mapping Protein Family Interactions: Intramolecular and Intermolecular Protein Family Interaction Repertoires in the PDB and Yeast , Jong Park, Michael Lappe &amp; Sarah A. Teichmann, Journal of Molecular Biology (2001). <a href="http://bio.cc/Publish/Paper/JMB_published_PSIMAP.pdf" rel="nofollow" title="http://bio.cc/Publish/Paper/JMB published PSIMAP.pdf" class="external">PDF file</a><span class="urlexpansion">&nbsp;(<em><a href="http://bio.cc/Publish/Paper/JMB_published_PSIMAP.pdf">http://bio.cc/Publish/Paper/JMB_published_PSIMAP.pdf</a></em>)</span> </li>
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     <li>Mapping Protein Family Interactions: Intramolecular and Intermolecular Protein Family Interaction Repertoires in the PDB and Yeast , Jong Park, Michael Lappe &amp; Sarah A. Teichmann, Journal of Molecular Biology (2001). <a class="external" title="http://bio.cc/Publish/Paper/JMB published PSIMAP.pdf" rel="nofollow" href="http://bio.cc/Publish/Paper/JMB_published_PSIMAP.pdf">PDF file</a><span class="urlexpansion">&nbsp;(<em><a href="http://bio.cc/Publish/Paper/JMB_published_PSIMAP.pdf">http://bio.cc/Publish/Paper/JMB_published_PSIMAP.pdf</a></em>)</span> </li>
     <li>[[Pinakpani Chakrabarti lab publication]] </li>
     <li>[[Pinakpani Chakrabarti lab publication]] </li>
</ol>
</ol>
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Latest revision as of 02:08, 22 August 2010

  1. Comparative interactomics analysis of protein family interaction networks using PSIMAP (protein structural interactome map).
    Daeui Park, Semin Lee, Dan Bolser, Michael Schroeder, Michael Lappe, Donghoon Oh and Jong Bhak Bioinformatics. 2005 May 24.  Comparative interactomics abstract
    - Supplementary table 1 - 1
    - Supplementary table 1 - 2
    - Supplementary table 1 - 3
    - Supplementary table 1 - 4
    - Supplementary table 3
  2. PSIbase: a database of Protein Structural Interactome map (PSIMAP). (http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15749693) Gong S, Yoon G, Jang I, Bolser D, Dafas P, Schroeder M, Choi H, Cho Y, Han K, Lee S, Choi H, Lappe M, Holm L, Kim S, Oh D, Bhak J. Bioinformatics. 2005 Mar 3
  3. Architecture of basic building blocks in protein and domain structural interaction networks (http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15613386). Moon HS, Bhak J, Lee KH, Lee D.Bioinformatics. 2005 Apr 15;21(8):1479-86. Epub 2004 Dec 21.
  4. Using convex hulls to extract interaction interfaces from known structures. (http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15231539) Panos Dafas, Dan Bolser, Jacek Gomoluch, Jong Park and Michael Schroeder, Bioinformatics. 10 July 2004. 20(10):1486-1490vanzari auto.
  5. HPID: The Human Protein Interaction Database. (http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15117749) Kyungsook Han, Byungkyu Park, Hyongguen Kim, Jinsun Hong and Jong Park, Bioinformatics, 29 Apr. 2004 (In press)
  6. Large scale co-evolution analysis of Protein Structural Interlogues using the global Protein Structural Interactome Map(PSIMAP). (http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=14764552) Wankyu Kim, Dan M. Bolser and Jong Park, Bioinformatics, 2004, 20(7):1138-1150.
  7. Visualisation and Graph-theoretic Analysis of a Large-scale Protein Structural Interactome. (http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=14531933) Dan M Bolser, Panos Dafas, Richard Harrington, Jong Park and Michael Schroeder, BMC Bioinformatics, 8 October 2003, 4;45:1471-2105.
  8. Visualization and Analysis of Protein Interactions. (http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12538268) Byonghyon Ju, ByungkyuPark, Jong Park and Kyungsook Han, Bioinformatics, 2003, 19:317-318.
  9. Predicting Protein Interactions in Human by Homologous Interactions in Yeast. Hyongguen Kim, Jong Park and Kyungsook Han, Lecture Notes in Computer Science, 2003, 2637:159-165.
  10. Network Biology (http://networkbiology.net): Datamining Biological Networks. IEEE Intelligent Systems (http://csdl.computer.org/comp/mags/ex/2002/03/x3toc.htm), May/June (Vol. 17, No. 3, pp66-80). 2002
  11. The Conservation of Protein Interaction Network in Evolution. (http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=11791232&dopt=Abstract) GIW2001 (http://www.jsbi.org/journal/GIW01/GIW01F14.html): The Twelfth International Conference on Genome Informatics, Tokyo Japan, 2001.
  12. Generating protein interactioin map from incomplete data: application of fold assignment. (http://bio.cc/PSIMAP/Paper/PSIMAP_bioinformatics_2001.html) Lappe M, Park J, Niggemann O, Holm L. Bioinformatics. 2001;17 Suppl 1:S149-56. PMID: 11473004 (http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=11473004&dopt=Abstract) [PubMed - indexed for MEDLINE]. PDF file (http://bio.cc/PSIMAP/Paper/bioinformatics_paper_for_fold_assignment_2001.pdf) dezmembrari auto
  13. Mapping Protein Family Interactions: Intramolecular and Intermolecular Protein Family Interaction Repertoires in the PDB and Yeast , Jong Park, Michael Lappe & Sarah A. Teichmann, Journal of Molecular Biology (2001). PDF file (http://bio.cc/Publish/Paper/JMB_published_PSIMAP.pdf)
  14. Pinakpani Chakrabarti lab publication



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